CDS

Accession Number TCMCG051C37222
gbkey CDS
Protein Id XP_024439428.1
Location complement(join(4485358..4485424,4486134..4486312,4486409..4486543,4486634..4486912,4487867..4488012,4488106..4488265,4489010..4489177,4490663..4491388,4492247..4492303,4492563..4492673,4492877..4493023,4493107..4493196,4493876..4493884))
Gene LOC7482356
GeneID 7482356
Organism Populus trichocarpa

Protein

Length 757aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024583660.1
Definition CCR4-NOT transcription complex subunit 3 isoform X3 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category K
Description General negative regulator of transcription subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K12580        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000075        [VIEW IN EMBL-EBI]
GO:0000077        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000288        [VIEW IN EMBL-EBI]
GO:0000289        [VIEW IN EMBL-EBI]
GO:0000932        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0001701        [VIEW IN EMBL-EBI]
GO:0001824        [VIEW IN EMBL-EBI]
GO:0001825        [VIEW IN EMBL-EBI]
GO:0001829        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006977        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007093        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007346        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009792        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0010948        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0030014        [VIEW IN EMBL-EBI]
GO:0030015        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030330        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031570        [VIEW IN EMBL-EBI]
GO:0031571        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033143        [VIEW IN EMBL-EBI]
GO:0033144        [VIEW IN EMBL-EBI]
GO:0033146        [VIEW IN EMBL-EBI]
GO:0033147        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0035770        [VIEW IN EMBL-EBI]
GO:0036464        [VIEW IN EMBL-EBI]
GO:0042770        [VIEW IN EMBL-EBI]
GO:0043009        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044773        [VIEW IN EMBL-EBI]
GO:0044774        [VIEW IN EMBL-EBI]
GO:0044783        [VIEW IN EMBL-EBI]
GO:0044819        [VIEW IN EMBL-EBI]
GO:0045786        [VIEW IN EMBL-EBI]
GO:0045787        [VIEW IN EMBL-EBI]
GO:0045930        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071156        [VIEW IN EMBL-EBI]
GO:0071158        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072331        [VIEW IN EMBL-EBI]
GO:0072395        [VIEW IN EMBL-EBI]
GO:0072401        [VIEW IN EMBL-EBI]
GO:0072413        [VIEW IN EMBL-EBI]
GO:0072422        [VIEW IN EMBL-EBI]
GO:0072431        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090068        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901987        [VIEW IN EMBL-EBI]
GO:1901988        [VIEW IN EMBL-EBI]
GO:1901990        [VIEW IN EMBL-EBI]
GO:1901991        [VIEW IN EMBL-EBI]
GO:1902400        [VIEW IN EMBL-EBI]
GO:1902402        [VIEW IN EMBL-EBI]
GO:1902403        [VIEW IN EMBL-EBI]
GO:1902806        [VIEW IN EMBL-EBI]
GO:1902807        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000036        [VIEW IN EMBL-EBI]
GO:2000045        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000134        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTGGTATGTTGGGGAACTGGAATCTCAGATTGATAGCTTTGAAGCTGAGATTGAGGGGCTTACTGTTAAGAAAGGAAAGACAAGGCCACCCAGACTGACACATTTAGAGGCATCCATTACACGGCACAAGCTTCATATAAAGAAGTTAGAGTTGATCCTGAGGCTACTAGACAACGATGAGTTGAGTCCTGAGCAGGTTAATGATGTTAAAGACTTCCTGGATGACTATGTGGAACGTAATCAGGAAGATTTTGATGATTTTAGTGATGTTGATGATCTTTACAACTCATTACCATTAGACAAGGTTGAATCTCTTGAAGACCTGGTTACAATTGGTCCTCCTGGTCTTGTGAAGGGTGCCCCCGTTCACAGCTTAAAGACTTCCTTGGTGACATCTGCTCCTCAAATGCCTGCCACTGTTGCTTCTACTCATCATGAGGGTGCTGTTGTTCAAGATCAAGCCGATGATACTACTTCACAGGATAGTAATTCTGATATTGTTGCAAGAACTCCTCCTGCCAAAAGTAGCATGGTTGGTTCTTCTGCTGCAGCAACACCAACTGGGAACCATGCACCTATTTCTGTGAATGTTCAGGCTCAAACATTGCATGATTTGTCAGCAGCTTCACCAACTCTTCCTGGTTCAACTTCTGTTCGAGGTGTCTTGGAAAATGCAGCTCCTTTTAATCCTTCTTCTCCCGCAACACTTGGCAATTCTATGAAGGAGGAAGAAATTGCAGGCTTCCCTGGCCGTAGATCATCACCTTCTCTTGCTGATGCTGGATTAGCAAGGGGCATTGGTAGAGGTGGCCTCTCTAGCCAGCCCTCGTCTAGTATCCCCCTCAGTCCTGTTGTTATTCCTAGCAACGGGGCTCATGGTTCAGTACCTTTAGCTTCTGACATTGCAAAGAGAAATATTTTGGGAAATGATGATAGAATTGGGAGTGCTGGAATGGTGCAGCCTCTGGCTTCCCCACTAAGTAACCGAATGATCTTGCCTCAGGCTGGTGATGGAACCAGTGCAGTTGATACTAGTAGTGCTGGTGAAGCTGCTACTATGGGTGGCAGAGTTTTCTCTCCTTTGGTCACTGGCATGCAATGGAGACCTGGGAGTTCCTTTCAAAATCAGAATGAACCGGGCCAATTTCGTGCAAGAACTGAAATAGCTCCTGATCAGAGAGAGAAATTTTTGCAGCGTCTTCAGCAAGTCCAGCAGCAAGGTCACAGTAACATTCTTGGCATGCCGCCTCTTACTGGTGGGAATCATAAGCAGTATTCTGCCCAACAAAACCCCCTTTTGCAGCAGTTTAATTCTCAAAGTTCATCTGTCTCTCAAGCTAGTTTAGGACTTGGAGTGCAGGCATCAGGTTTCAATACTGTTACATCTGCTGCTTTACAGCAGCCAAATTCCATCCATCAGCAGTCTAGTCAGCAAGTTGTGATGTCAAGTGGTGCAAAAGATGCTGAACTTGGCCATTCAACAGTTGATGAGCAGCAGCTAAAGCAGAATTTACCTGAGGATTCAACCACCAAATCTGCTCTTACATCTGGGCTTGGAAAAAGTCTTGTGAATGAGGATGAACTCACATCTCCATATGCAATGGATACTTCTGCTGGGGCATCTGGTTCCTTGACAGAGCCTTTACAAGTGCCAAGAGATATTGATCTCTCTCCAGGGCAACTCCTACAATCCAGTCAACCATCTAGTGGCCTAGGTGTTATTGGCCGGAGAAGTGTTTCGGACCTTGGTGCCATTGGCGATAATCTCACTGGATCTGCTGTAAATTCTGGGGCAATGCACAATCAGTTATACAATTTACAGATGCTTGAGGCTGCATATCACAAGCTTCCTCAACCTAAAGACTCAGAACGAGCTAGGAGCTATATTCCAAGGCACCCGGCAGCCACCCCTCCTAGCTATCCTCAAGTTCAGTTACCAATGGCAAGTAACCCTGCATTCTGGGAACGACTAAGCATGCATAGTTATGGAACTGATACCTTGTTCTTTGCTTTTTACTATCAACAGAATACCTATCAGCAGTATCTGGCTGCGAAAGAGCTAAAGAAGCAATCTTGGAGATACCACAGAAAATACAACACCTGGTTTCAACGGCATGAGGAGCCAAAAGTTACCACTGATGAATATGAACAGGGGACATATGTGTATTTTGATTTCCATGTTGGCAATGAGGACAAACAAGGATGGTGTCAAAGAATCAAGACAGAGTTCACTTTTGAGTATAACTATCTTGAAGATGAACTCATTGTCTAG
Protein:  
MWYVGELESQIDSFEAEIEGLTVKKGKTRPPRLTHLEASITRHKLHIKKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDDFSDVDDLYNSLPLDKVESLEDLVTIGPPGLVKGAPVHSLKTSLVTSAPQMPATVASTHHEGAVVQDQADDTTSQDSNSDIVARTPPAKSSMVGSSAAATPTGNHAPISVNVQAQTLHDLSAASPTLPGSTSVRGVLENAAPFNPSSPATLGNSMKEEEIAGFPGRRSSPSLADAGLARGIGRGGLSSQPSSSIPLSPVVIPSNGAHGSVPLASDIAKRNILGNDDRIGSAGMVQPLASPLSNRMILPQAGDGTSAVDTSSAGEAATMGGRVFSPLVTGMQWRPGSSFQNQNEPGQFRARTEIAPDQREKFLQRLQQVQQQGHSNILGMPPLTGGNHKQYSAQQNPLLQQFNSQSSSVSQASLGLGVQASGFNTVTSAALQQPNSIHQQSSQQVVMSSGAKDAELGHSTVDEQQLKQNLPEDSTTKSALTSGLGKSLVNEDELTSPYAMDTSAGASGSLTEPLQVPRDIDLSPGQLLQSSQPSSGLGVIGRRSVSDLGAIGDNLTGSAVNSGAMHNQLYNLQMLEAAYHKLPQPKDSERARSYIPRHPAATPPSYPQVQLPMASNPAFWERLSMHSYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVTTDEYEQGTYVYFDFHVGNEDKQGWCQRIKTEFTFEYNYLEDELIV